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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1441787 chr8:20796299 A/C INTS10 chr8:19674651-19709594:+ -0.56 -6.4 4.63E-10 Box Plot
BLCA rs1441787 chr8:20796299 A/C KIAA1967 chr8:22462257-22477981:+ -0.57 -6.31 7.84E-10 Box Plot
BLCA rs1441787 chr8:20796299 A/C PSD3 chr8:18384811-18942240:- -0.5 -6 4.5E-9 Box Plot
BLCA rs1441787 chr8:20796299 A/C TMEM66 chr8:29920528-29939940:- -0.5 -6.22 1.31E-9 Box Plot
BLCA rs1441787 chr8:20796299 A/C ZNF395 chr8:28203102-28260218:- -0.53 -5.97 5.33E-9 Box Plot
BLCA rs144300052 chr6:26635066 G/C ZNF322B chr9:99957633-99961910:- 0.54 9.9 1.02E-20 Box Plot
BLCA rs144433849 chr11:77659222 GA/G INTS4L1 chr7:64601603-64694600:+ 0.5 7.09 6.58E-12 Box Plot
BLCA rs144440915 chr3:112764253 TA/T GCG chr2:162999383-163008914:- 0.51 6.21 1.42E-9 Box Plot
BLCA rs144592635 chr1:227109639 T/TC PMP22 chr17:15133094-15168643:- 0.54 6.51 2.39E-10 Box Plot
BLCA rs144749247 chr20:53247969 G/GAAGAAAGGA KRTAP13-1 chr21:31768392-31769140:+ 0.16 6.45 3.3E-10 Box Plot
BLCA rs14484 chr15:91505447 C/G LEPR chr1:65886335-66107242:+ 0.71 6.1 2.64E-9 Box Plot
BLCA rs144883744 chr18:5844751 C/T KRTAP8-1 chr21:32185015-32185570:- 0.48 7.14 4.63E-12 Box Plot
BLCA rs1450258 chr2:83901389 A/G TRIM22 chr11:5710919-5758319:+ 0.22 6.06 3.17E-9 Box Plot
BLCA rs145105523 chr14:39826704 TC/T LOC647288 chr13:75811890-75814517:- -0.42 -6.63 1.12E-10 Box Plot
BLCA rs145140188 chr11:77627431 G/C INTS4L1 chr7:64601603-64694600:+ 0.49 6.76 5.05E-11 Box Plot